Open Access Open Access  Restricted Access Access granted  Restricted Access Subscription Access

Vol 59, No 5 (2023)

Cover Page

Full Issue

Open Access Open Access
Restricted Access Access granted
Restricted Access Subscription Access

Articles

Prospects to Improving Biological Activity of Agricultural Formulations Based on Bacteria of the Genus Bacillus and Chitosan Nanocomposites

Yarullina L.G., Hileuskaya K.S., Nikolaichuk V.V., Zaikina E.A., Herasimovich K.M., Sorokan A.V., Rybinskaya K.I., Burkhanova G.F., Ovchinnikov I.A., Tsvetkov V.O., Yalouskaya N.A., Cherepanova E.A., Kalatskaja J.N., Mardanshin I.S.

Abstract

The review examines the properties of endophytic bacteria of the genus Bacillus as objects of biocontrol, prospects to expand the spectrum of their protective action based on complexes with chitosan derivatives. The mechanisms of direct and indirect effects of bacteria on the protective potential of plants are described, the role of the pro-/antioxidant system in the formation of systemic protective reactions is analyzed. The immunostimulating properties of chitosan derivatives and its modifications with organic molecules and metal nanoparticles are analyzed. The prospects of using Bacillus spp. bacterial complexes with nano- and submicron particles of chitosan derivatives to expand the spectrum of protective action of new biofungicides and immunostimulants based on them are shown.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):427-439
pages 427-439 views

Effect of Peroxynitrite and tert-Butyl Hydroperoxide on Thiol Ligands of Dinitrosyl Iron Complexes

Pugachenko I.S., Nasybullina E.I., Kosmachevskaya O.V., Shumaev K.B., Topunov A.F.

Abstract

Low molecular weight dinitrosyl iron complexes (DNICs) with thiol-containing ligands are a physiological form for deposit and transport of nitric oxide (NO) in the organism, herewith DNICs can exhibit antioxidant and antiradical properties. It was that DNICs containing cysteine, glutathione and lipoic acid as ligands, decreased the rate of dihydrodamine oxidation by peroxynitrite formed during 3-morpholinononymine decomposition. Thiol (sulfhydryl) ligands are present in DNICs in the form of thiolate anions (R-S), which protects these groups from oxidation by peroxynitrite. When tert-butyl peroxide was used as an oxidizer at low concentration, the protective effect of DNICs on their SH-groups was observed for complexes with lipoic acid (LA-DNIC) and with glutathione (GS-DNIC). LA-DNIC was more resistant to oxidizing agents and more effective peroxynitrite trap than other DNICs. DNICs associated with bovine serum albumin had a negligible protective effect on cysteine residue during oxidation by peroxynitrite and tert-butyl hydroperoxide. The obtained results allow us to consider low molecular weight DNICs with thiol ligands as peroxynitrite traps and thiol residues protectors in proteins.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):440-449
pages 440-449 views

Comparison of HydSl Hydrogenase of Thiocapsa bogorovii and its Modification with Truncated C-terminus of HydS

Starodubov A.S., Khasimov M.K., Khusnutdinova A.N., Zorin N.A., Tsygankov A.A.

Abstract

Native HydSL hydrogenase of Thiocapsa bogorovii and its modification with truncated C-terminus of HydS (delta54HydS) were shown to be similar in specific activity, thermostability and temperature dependence of activity. It supports the suggestion that C-terminus of HydS does not participate in stabilization of the enzyme structure. Ag+ ions irreversibly inactivated both hydrogenases but delta54HydS was more sensitive to this inhibitor. In the presence of Ag+ the absorption peak at 410 nm was bleached indicating the destruction of FeS clusters. Protein globule was also destructed by Ag+. Prolonged incubation of hydrogenase with Ag+ ions led to disappearance of CO and CN peaks in IR spectra indicating NiFe center impairment. Data suggest that the first target of Ag+ ions is distal FeS cluster, and C-terminus of HydS interacts with Ag+ decreasing local ion concentration near the distal FeS cluster.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):450-456
pages 450-456 views

Isolation, Purification and some Properties of Staphylolytic Enzyme from Staphylococcus hyicus

Fedorov T.V., Teymurazov M.G., Surin A.K., Tazina O.I., Biketov S.F.

Abstract

The paper presents data on the identification of a new staphylolytic enzyme from the cultural liquid of Staphylococcus hyicus B-8870. The primary sequence of the enzyme has the maximum similarity to the CHAP domain of N-acetylmuramoyl-L-alanine amidase from Staphylococcus sciuri DD 4747. The enzyme is active against a wide range of microorganisms of the Staphylococcus genus, including MRSA strains. The molecular weight of the enzyme is 13993 Da, the absorption coefficient at 280 nm is \(\varepsilon \frac{{{\text{mg}}}}{{{\text{ml}}}}\) 3.94, the value of the isoelectric point pI 10.35. The specific activity of the enzyme in relation to the cell suspension of S.aureus FDA 209P is 1518 U/mg with an optimum pH of 7.7 and a temperature of 40°C.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):457-464
pages 457-464 views

Comparison of Biochemical Properties of Recombinant Alpaca (Vicugna pacos) Chymosins Produced in Pro- and Eukaryotic Expression Systems

Belenkaya S.V., Elchaninov V.V., Chirkova V.Y., Shcherbakov D.N.

Abstract

Based on the yeast Kluyveromyces lactis, a strain-producer of recombinant alpaca prochymosin (Vicugna pacos) was developed. A comparative analysis of the biochemical properties of recombinant alpaca chymosin obtained in the expression systems of K. lactis and Escherichia coli was carried out. It was found that the recombinant alpaca chymosin synthesized in K. lactis exceeds the analog obtained in E. coli by 12.9 times in the number of enzyme turnovers, and by 2.9 times in catalytic efficiency. Compared to chymosin expressed in E. coli, the enzyme obtained in a eukaryotic producer has a thermal stability threshold increased by 5°C. Replacing a prokaryotic producer with a eukaryotic one enhances the negative sensitivity of the milk-clotting activity of recombinant alpaca chymosin to an increase in substrate pH in the range of 6.1–6.9, which is accompanied by an increase in the duration of coagulation by 8–35%. With an increase in the concentration of CaCl2 in the substrate, the coagulation activity of the target enzyme synthesized in E. coli was 12–14% higher than that of its analogue obtained in K. lactis.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):465-471
pages 465-471 views

Cyclodextrin Glucanotransferase of Alkalophilic Strain Caldalkalibacillus mannanilyticus IB-OR17-B1

Milman P.Y., Gilvanova E.A., Aktuganov G.E.

Abstract

Extracellular cyclodextrin glucanotransferase (CGTase, K.F.2.1.19) was characterized for the first time in a strain of bacteria of the species Caldalkalibacillus mannanilyticus IB-OR17-B1. The enzyme was isolated from the culture supernatant using ultrafiltration and affinity adsorption on corn starch. The specific activity of the CGTase was increased in 18-fold as a result of purification with the enzyme yield 56%. The molecular mass of the purified enzyme was 70 kDa according to the denaturing electrophoresis in polyacrylamide gel. The CGTase of C. mannanilyticus IB-OR17-B1 demonstrated a maximal cyclizing activity under pH 8 and temperature 60°C, respectively, and it was stable in the pH range 7–10 and temperatures ≤70°C. The thermal stability of the enzyme under 70°C increased by 10–15% in the presence 5–10 mM of calcium and magnesium salts. The cations of Ag+, Cu2+, Zn2+, Fe2+ and Fe3+ in concentration 5 mM inhibited a CGTase activity by 90, 26, 23, 18 and 11%, respectively. The purified CGTase under optimal conditions and enzyme-substrate ratio 1 U/g converted a potato starch during 24 h to mixture of α-, β- and γ-cyclodextrins with mass ratio 38.8 : 52.6 : 8.6 and yield 42%.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):472-482
pages 472-482 views

Fatty Acid Profiles Change and the Volatile Organic Compounds Formation During the Cow’S Milk Fermentation with Probiotic Lacticaseibacillus paracasei Strains

Moiseenko K.V., Shabaev A.V., Glazunova O.A., Savinova O.S., Fedorova T.V.

Abstract

In this work, a comparative analysis of the profile of fatty acids (FA) and volatile organic compounds (VOCs) for skimmed cow’s milk fermented by four different probiotic strains of Lacticasibacillus paracasei (ABK, KF1, MA2 and MA3) was carried out. Analysis of FA and VOC profiles was performed using gas chromatography with mass spectrometric detection (GC-MS). For additional visualization of odor changes and its intensity in the fermented milk samples, the E-nose “electronic nose” odor analyzer was used. In total, presence of 42 different FA was detected in all samples, of which 17 were saturated, 8 monounsaturated, and 5 polyunsaturated. The strain-specific differences between the studied samples were of a complex nature and could not be explained only by the variation in the contribution of several individual FAs. The FA-nutritional indices, characterizing the nutritional and biological value of the samples, were different for milk fermented by different strains. Analysis of VOCs showed that the main odor-forming compounds in the studied samples were FAs and their reaction products, 2-heptanone, 2-nonanone, and 2-nonanol, formed as a result of the following chain of transformations: β-oxidation → decarboxylation → reduction. The aroma of L. paracasei fermentation products, predicted on the basis of the odors of individual VOCs, generally coincided with their organoleptic assessment – a flavor typical of fermented milk (yogurt, curdled milk) with floral and fruity notes.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):483-493
pages 483-493 views

Mechanisms of Control by Pseudomonas fluorescens of Barley Root Rot Caused by Fusarium culmorum

Shakhnazarova V.Y., Syrova D.S., Lebedinskii M.I., Vishnevskaya N.A., Shaposhnikov A.I., Borodina E.V., Strunnikova O.K.

Abstract

In this paper, we found out why in the presence of the rhizobacterium Pseudomonas fluorescens 2137, the intensity of barley fusarium root rot caused by Fusarium culmorum 30 decreases, if there is no obvious decrease in the amount of fungus in the roots in the presence of the bacterium. It has been suggested that (1) the presence of rhizobacteria stimulates the defence reactions in barley, (2) rhizobacteria reduces the production of trichothecene toxins by F. culmorum 30, a known factor of aggressiveness of the fungus. The responses of barley to the colonization of its roots by fungus and bacteria were studied in sterile vermiculite for 11 days by the intensity of expression of the LOX, PAL, PR4 and PR1 genes. The production of F. culmorum 30 trichothecene toxins was evaluated by the expression level of the TRI13 gene. As a result, it was found that P. fluorescens 2137 induced the expression of all studied defence genes already in diurnal barley roots, but only in the presence of F. culmorum 30. In the presence of the bacterium, the expression level of the TRI13 gene did not decrease, however, a decrease in the number of diseased plants suggests that P. fluorescens 2137 is capable of detoxifying trichothecene toxins produced by the fungus or inducing this ability in barley.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):494-501
pages 494-501 views

Caffeic Acid in Various Formulations as a Growth and Resistance Regulator of Potato Microclones in in vitro Culture

Yalouskaya N.A., Kalatskaja J.N., Laman N.A., Nikalaichuk V.V., Kraskouski A.N., Hileuskaya K.S.

Abstract

The article discusses the influence of caffeic acid (CA), its mix with chitosan (CHT + CA) and chitosan-based conjugate (CHT-CA) on growth and proline content of microclone potato plants (Solanum tuberosum L.) in in vitro culture under optimal conditions and under prolonged osmotic stress caused by polyethylene glycol. Under optimal conditions CHT-CA and CA, acting as moderate strength stressors, accelerate the growth and development of potato microclones and increase the proline accumulation in the stems. Under osmotic stress CA and CHT-CA promote the resistance of potato microclones and maintain their active growth. And such effect persists during the reparation period. The mechanical mix CHT + CA causes inhibition of microclonal plants’ growth and development accompanied by a significant accumulation of proline which is aggravated under stress.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):502-511
pages 502-511 views

Phage Antibodies for Kanamycin Detection

Guliy O.I., Evstigneeva S.S., Staroverov S.A., Fomin A.S., Karavaeva O.A.

Abstract

Recombinant antibodies specific to kanamycin were obtained using a sheep display library of scFv fragments (Griffin.1) and the possibility of their use for the determination of kanamycin by dot-immunoassay was demonstrated. The minimum detectable concentration of kanamycin is 1 μg/mL (distinguishable label binding other than background). It has been shown that anti-kanamycin phage antibodies are specific for kanamycin and do not interact with other antibiotics (neomycin, tetracycline, ampicillin, gentamicin). Anti-kanamycin phage antibodies are a promising alternative to monoclonal antibodies for use in the determination of kanamycin.

Prikladnaâ biohimiâ i mikrobiologiâ. 2023;59(5):512-519
pages 512-519 views

ХРОНИКА

pages 520-522 views